This dataset contains single-nucleus RNA sequencing (snRNAseq) raw data in FASTQ format for 94 human middle temporal gyrus (MTG) samples from Parkinson's patients and healthy controls. It's part of the PD5D atlas, where the same subjects were also profiled with other omics assays incl. genotyping, single-cell ATACseq, and spatial transcriptomics. ASAP Team: Scherzer Dataset Name: scherzer-pmdbs-sn-rnaseq-mtg, v1.2 Principal Investigator: Clemens Scherzer Co-Principal Investigator: Xianjun Dong Contributors: Parker, Jacob; Scherzer, Clemens; Dong, Xianjun; Serrano, Geidy; Beach, Thomas; Cline, Madison; Liao, Zhixiang; Tuncali, Idil; Lin, Zechuan Sample Summary: Resources and Additional Information Protocols GitHub: https://github.com/NeurogenomicsLab/PD5D Protocols: https://dx.doi.org/dx.doi.org/10.17504/protocols.io.j8nlk4k55g5r/v2 Dataset DOI: https://doi.org/10.5281/zenodo.16751625 Associated Publications: NA CRN Cloud GitHub: https://github.com/ASAP-CRN CRN Cloud DOI: https://doi.org/10.5281/zenodo.8384742 CRN Cloud Data Dictionary: https://storage.googleapis.com/asap-public-assets/wayfinding/ASAP-CRN-Cloud-Data-Dictionary.pdf Data Dictionary Version: v4.4 CRN Cloud Release...
Access requires approval by the data custodian. The collection's description and structure are public; querying the data requires an approved request.
PD5D single-nucleus RNA-seq is published on ASAP CRN Cloud.